ncRNA ID | novel_gma_miR5510 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:27812364-27812453 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835761 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAAAAGAGGAUAUAAAUAAUU - 21 |
Stem-loop(if miRNA) |
--                                   CA   UGC   UAAAAGAGGAUAUAAAUAAUUUCAGAGUUAGUAAU  UAA   A   |||||||||||||||||||||||||||||||||||  |||   AUUUUCUCCUAUAUUUAUUAAAGUCUUAAUCGUUA  GUU   G GG                                   AA   UUU |
Stem-loop sequence | UAAAAGAGGAUAUAAAUAAUUUCAGAGUUAGUAAUCAUAAUGCAGUUUUUGAAAUUGCUAAUUCUGAAAUUAUUUAUAUCCUCUUUUAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003540786.3 |
|
2.5 | PREDICTED: Glycine max probable WRKY transcription factor 31 (LOC100797998), mRNA | probable WRKY transcription factor 31(LOC100797998) | coding protein | psRNATarget |