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BaseInfo

ncRNA ID novel_gma_miR5510
Species Glycine max
Class miRNA
Genome position Chr5:27812364-27812453 [+]
Reference genome Glycine_max_v2.0
Source SRR835761
Length 21
Mature sequence(if miRNA) 1 - UAAAAGAGGAUAUAAAUAAUU - 21
Stem-loop(if miRNA) --                                   CA   UGC
  UAAAAGAGGAUAUAAAUAAUUUCAGAGUUAGUAAU  UAA   A
  |||||||||||||||||||||||||||||||||||  |||
  AUUUUCUCCUAUAUUUAUUAAAGUCUUAAUCGUUA  GUU   G
GG                                   AA   UUU
Stem-loop sequence UAAAAGAGGAUAUAAAUAAUUUCAGAGUUAGUAAUCAUAAUGCAGUUUUUGAAAUUGCUAAUUCUGAAAUUAUUUAUAUCCUCUUUUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003540786.3
ncRNA:21   UUAAUAAAUAUAGGAGAAAAU   1
  *|||*|||||||=||||||||
targets:61   CAUUCUUUAUAUUCUCUUUUA   81

2.5 PREDICTED: Glycine max probable WRKY transcription factor 31 (LOC100797998), mRNA probable WRKY transcription factor 31(LOC100797998) coding protein psRNATarget