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BaseInfo

ncRNA ID	novel_gma_miR5506
Species	Glycine max
Class	miRNA
Genome position	Chr3:39100221-39100299 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835761
Length	21
Mature sequence(if miRNA)	1 - UCUCAAGAAAAUGAAUGAUGA - 21
Stem-loop(if miRNA)	--               A U   A        -UAAC  G   AUCAUUCAUUUUCUU A AUC AAUGGUUG     AA U   ||||||||||||||| | ||| ||||||||     ||   UAGUAAGUAAAAGAA U UAG UUACUAAU     UU A AG               C C   A        UCUAA  A
Stem-loop sequence	AUCAUUCAUUUUCUUAAUAUCAAAUGGUUGUAACAAGUAAUUAAUCUUAAUCAUUAGAUCUCAAGAAAAUGAAUGAUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014770344.1	ncRNA:21   AGUAGUAAGUAAAAGAACUCU   1   *=||=*||||||||||||||| targets:503   AUAUUCUUCAUUUUCUUGAGA   523 Target Full Sequence	2.0	PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (LOC106796805), transcript variant X3, mRNA	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290(LOC106796805)	coding protein	psRNATarget
XM_014770343.1	ncRNA:21   AGUAGUAAGUAAAAGAACUCU   1   *=||=*||||||||||||||| targets:503   AUAUUCUUCAUUUUCUUGAGA   523 Target Full Sequence	2.0	PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 (LOC106796805), transcript variant X2, mRNA	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290(LOC106796805)	coding protein	psRNATarget
XM_014764077.1	ncRNA:21   AGUAGUAAGUAAAAGAACUCU   1   *=||=*||||||||||||||| targets:1736   AUAUUCUUCAUUUUCUUGAGA   1756 Target Full Sequence	2.0	PREDICTED: Glycine max photosystem I reaction center subunit VI, chloroplastic-like (LOC100806824), transcript variant X2, mRNA	photosystem I reaction center subunit VI, chloroplastic-like(LOC100806824)	coding protein	psRNATarget
XM_014764078.1	ncRNA:21   AGUAGUAAGUAAAAGAACUCU   1   *=||=*||||||||||||||= targets:1122   AUAUUCUUCAUUUUCUUGAGG   1142 Target Full Sequence	3.0	PREDICTED: Glycine max photosystem I reaction center subunit VI, chloroplastic-like (LOC100806824), transcript variant X3, mRNA	photosystem I reaction center subunit VI, chloroplastic-like(LOC100806824)	coding protein	psRNATarget
XM_003539204.2	ncRNA:21   AGUAGUAAGUAAAAGAACUCU   1   *=||=*||||||||||||||= targets:1736   AUAUUCUUCAUUUUCUUGAGG   1756 Target Full Sequence	3.0	PREDICTED: Glycine max photosystem I reaction center subunit VI, chloroplastic-like (LOC100806824), transcript variant X1, mRNA	photosystem I reaction center subunit VI, chloroplastic-like(LOC100806824)	coding protein	psRNATarget