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BaseInfo

ncRNA ID	novel_gma_miR5502
Species	Glycine max
Class	miRNA
Genome position	Chr2:32402608-32402760 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835761
Length	22
Mature sequence(if miRNA)	1 - UACGAAUCAAGUUGAUCUGUAA - 22
Stem-loop(if miRNA)	--               C        G                      G  C    A     G  A        A   AUGGAUCAACUUGAU UGUAAGUU GUGUGUAACUGUUACGGAUCAA UU AUCC UAAGU AC UACGGAUC A   ||||||||||||||| |||||||| |||||||||||||||||||||| || |||| ||||| || |||||||| C   UGUCUAGUUGAACUA GCAUUCAA CACACAUUGAUAAUGUCUAGUU AA UAGG AUUUA UG AUGCCUAG U AA               A        A                      G  C    C     G  A        U
Stem-loop sequence	AUGGAUCAACUUGAUCUGUAAGUUGGUGUGUAACUGUUACGGAUCAAGUUCAUCCAUAAGUGACAUACGGAUCAACUUGAUCCGUAAGUGAUUUACGGAUCAAGUUGAUCUGUAAUAGUUACACACAAACUUACGAAUCAAGUUGAUCUGUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006600975.2	ncRNA:22   AAUGUCUAGUUGAACUAAGCAU   1   ||||=||||||||||||*|||| targets:1251   UUACGGAUCAACUUGAUCCGUA   1272 Target Full Sequence	2.5	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_006600975.2	ncRNA:22   AAUGUCUAGUUGAACUAAGCAU   1   *|||||||=||||||||*|||| targets:1223   AUACAGAUUAACUUGAUCCGUA   1244 Target Full Sequence	2.5	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget
XM_006593444.2	ncRNA:22   AAUGUCUAGUUGAACUAAGCAU   1   *|||=||||||*|||||||||| targets:3676   AUACGGAUCAAGUUGAUUCGUA   3697 Target Full Sequence	2.5	PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA	calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841)	coding protein	psRNATarget
XM_003524153.3	ncRNA:22   AAUGUCUAGUUGAACUAAGCAU   1   *||||*|||||*|||||||||| targets:197   AUACAAAUCAAAUUGAUUCGUA   218 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA	uncharacterized LOC100805437(LOC100805437)	coding protein	psRNATarget
XM_014762418.1	ncRNA:22   AAUGUCUAGUUGAACUAAGCAU   1   ||-||||*||||*||||||||| targets:1078   UU-CAGACCAACAUGAUUCGUA   1098 Target Full Sequence	2.5	PREDICTED: Glycine max O-glucosyltransferase rumi-like (LOC100787504), mRNA	O-glucosyltransferase rumi-like(LOC100787504)	coding protein	psRNATarget