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BaseInfo

ncRNA ID	novel_gma_miR5501
Species	Glycine max
Class	miRNA
Genome position	Chr2:36213555-36213665 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835761
Length	24
Mature sequence(if miRNA)	88 - AGAAAUUUUUGCUAACGUCGGCCA - 111
Stem-loop(if miRNA)	---        UU     C         G  UU  UU       CU    U     U    AGAAAUUU  GCUAA GUCGGCCAA AA  UU  UUGGUCG  GUCA CUAGG U    ||||||||  ||||| ||||||||| ||  ||  |||||||  |||| |||||    UUUUUAGA  UGGUU CAGCCGGUU UU  AG  AACCAGU  UAGU GAUUU U UCU        -U     A         G  UU  -U       UG    U     U
Stem-loop sequence	AGAAAUUUUUGCUAACGUCGGCCAAGAAUUUUUUUUGGUCGCUGUCAUCUAGGUUUUUUUAGUUGAUGUUGACCAAUGAUUUUGUUGGCCGACAUUGGUUAGAUUUUUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT093666.1	ncRNA:24   ACCGGCUGCAAUCGUUUUUAAAGA   1   |**==||||||||||||||*|||| targets:351   UUAUUGACGUUAGCAAAAAGUUCU   374 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-17J13 unknown mRNA	NA	coding protein	psRNATarget
NM_001317566.1	ncRNA:24   ACCGGCUGCAAUCGUUUUUAAAGA   1   |**==||||||||||||||*|||| targets:351   UUAUUGACGUUAGCAAAAAGUUCU   374 Target Full Sequence	1.5	Glycine max uncharacterized LOC100817544 (LOC100817544), mRNA	uncharacterized LOC100817544(LOC100817544)	coding protein	psRNATarget
XM_006579480.2	ncRNA:24   ACCGGCUGCAAUCGUUUUUAAAGA   1   |**==||||||||||||||*|||| targets:386   UUAUUGACGUUAGCAAAAAGUUCU   409 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100817544 (LOC100817544), transcript variant X2, mRNA	uncharacterized LOC100817544(LOC100817544)	coding protein	psRNATarget
XM_003555814.3	ncRNA:24   ACCGGCUGCAAUCGUUUUUAAAGA   1   ||*==|||||*|||||||||*||| targets:1125   UGUUUGACGUAAGCAAAAAUCUCU   1148 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized protein At4g06744-like (LOC100796207), mRNA	uncharacterized protein At4g06744-like(LOC100796207)	coding protein	psRNATarget
AK286966.1	ncRNA:24   ACCGGCUGCAAUCGUUUUUAAAGA   1   ||*==|||||*|||||||||*||| targets:1811   UGUUUGACGUAAGCAAAAAUCUCU   1834 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-41-C06	NA	coding protein	psRNATarget