Search result

BaseInfo

ncRNA ID novel_gma_miR5499
Species Glycine max
Class miRNA
Genome position Chr2:38035697-38035772 [+]
Reference genome Glycine_max_v2.0
Source SRR835761
Length 22
Mature sequence(if miRNA) 1 - CAAUUUCGAGCGUUUUGACAUA - 22
Stem-loop(if miRNA) --C           -  U    AUAUU     -----  UC
   AAUUUCGAGCG UU UGAC     AUGGG     CC  A
   ||||||||||| || ||||     |||||     ||
   UUGAAGUUUGC GA AUUG     UAUCC     GG  A
CAU           U  C    AAAAC     UUACA  CA
Stem-loop sequence CAAUUUCGAGCGUUUUGACAUAUUAUGGGCCUCAAACGGACAUUCCUAUCAAAAGUUACAGUCGUUUGAAGUUUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB171037.1
ncRNA:22   AUACAGUUUUGCGAGCUUUAAC   1
  |||*||=|=|||||||||||||
targets:35   UAUAUCGAGACGCUCGAAAUUG   56

3.0 Sequence 8701 from Patent EP2559767 NA coding protein psRNATarget
LQ242706.1
ncRNA:22   AUACAGUUUUGCGAGCUUUAAC   1
  |||*||=|=|||||||||||||
targets:35   UAUAUCGAGACGCUCGAAAUUG   56

3.0 Sequence 8701 from Patent EP2985353 NA coding protein psRNATarget
HI410576.1
ncRNA:22   AUACAGUUUUGCGAGCUUUAAC   1
  |||*||=|=|||||||||||||
targets:35   UAUAUCGAGACGCUCGAAAUUG   56

3.0 Sequence 8701 from Patent EP2074227 NA coding protein psRNATarget