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BaseInfo

ncRNA ID novel_gma_miR5497
Species Glycine max
Class miRNA
Genome position Chr11:2690377-2690436 [+]
Reference genome Glycine_max_v2.0
Source SRR835761
Length 24
Mature sequence(if miRNA) 37 - GUUGAUCGGGUAUGGGUUCGGGUU - 60
Stem-loop(if miRNA) --           -     CU UG  -G  UA
  CUCGAAUCCGU CCCGA  U  AC  AG  A
  ||||||||||| |||||  |  ||  ||
  GGGCUUGGGUA GGGCU  A  UG  UC  U
UU           U     -- GU  AG  CA
Stem-loop sequence CUCGAAUCCGUCCCGACUUUGACGAGUAAUACCUGAGUUGAUCGGGUAUGGGUUCGGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006579806.2
ncRNA:24   UUGGGCUUGGGUAUGGGCUAGUUG   1
  ||||=|||=|||||||||=|||||
targets:118   AACCUGAAUCCAUACCCGGUCAAC   141

2.5 PREDICTED: Glycine max 4-coumarate--CoA ligase-like 7 (LOC102670415), mRNA 4-coumarate--CoA ligase-like 7(LOC102670415) coding protein psRNATarget