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BaseInfo

ncRNA ID novel_gma_miR5496
Species Glycine max
Class miRNA
Genome position Chr20:31038323-31038504 [+]
Reference genome Glycine_max_v2.0
Source SRR835761
Length 20
Mature sequence(if miRNA) 1 - AACAAAUCCGUCGUAAAAUU - 20
Stem-loop(if miRNA) --AA  A          A   UAU              -    -A     A   AC          U     UUC      C  UGAUGGCAU
    CA AUCCGUCGUA AAU   UCGCAUUCUAAGAU GGUC  UGUAC CAG  CUGUCUUAGA UGUGG   AUUCUA GA         C
    || |||||||||| |||   |||||||||||||| ||||  ||||| |||  |||||||||| |||||   |||||| ||
    GU UGGGCAGCAU UUA   AGCGUAAGAUUCUG CCAG  ACAUG GUU  GACAGAAUCU ACACU   UAAGAU CU         A
UAUC  G          C   CAC              U    AC     C   --          U     UAA      A  GAUCAGACA
Stem-loop sequence AACAAAUCCGUCGUAAAAUUAUUCGCAUUCUAAGAUGGUCAUGUACACAGACCUGUCUUAGAUUGUGGUUCAUUCUACGAUGAUGGCAUCAACAGACUAGUCAUAGAAUAAUUCACAUUCUAAGACAGUUGCGUACACAGACCUGUCUUAGAAUGCGACACAUUCUACGACGGGUGUGCUAU