ncRNA ID | novel_gma_miR5491 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:42463273-42463337 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835761 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AAAGACUUAUGGAUCAAGUUGA - 22 |
Stem-loop(if miRNA) |
--      UUA        G        CAAU   AAAGAC   UGGAUCAA UUGAUCCG    A   ||||||   |||||||| ||||||||    G   UUUCUG   GCCUAGUU AACUAGGC    A AU      UAC        G        ACUC |
Stem-loop sequence | AAAGACUUAUGGAUCAAGUUGAUCCGCAAUAGACUCACGGAUCAAGUUGAUCCGCAUGUCUUUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003547498.3 |
|
2.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
XM_014768353.1 |
|
2.5 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |