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BaseInfo

ncRNA ID novel_gma_miR5491
Species Glycine max
Class miRNA
Genome position Chr18:42463273-42463337 [+]
Reference genome Glycine_max_v2.0
Source SRR835761
Length 22
Mature sequence(if miRNA) 1 - AAAGACUUAUGGAUCAAGUUGA - 22
Stem-loop(if miRNA) --      UUA        G        CAAU
  AAAGAC   UGGAUCAA UUGAUCCG    A
  ||||||   |||||||| ||||||||    G
  UUUCUG   GCCUAGUU AACUAGGC    A
AU      UAC        G        ACUC
Stem-loop sequence AAAGACUUAUGGAUCAAGUUGAUCCGCAAUAGACUCACGGAUCAAGUUGAUCCGCAUGUCUUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:22   AGUUGAACUAGGUAUUCAGAAA   1
  ||||||||||||=||||||||*
targets:463   UCAACUUGAUCCGUAAGUCUUA   484

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:22   AGUUGAACUAGGUAUUCAGAAA   1
  ||||||||||||=||||||||*
targets:1058   UCAACUUGAUCCGUAAGUCUUA   1079

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget