| ncRNA ID | novel_gma_miR5490 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr18:39725748-39725966 [+] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR835761 |
| Length | 24 |
| Mature sequence(if miRNA) | 196 - AGGGACGAAAAUGACUAUUUACCC - 219 |
| Stem-loop(if miRNA) |
-- -A A A C G A --------U U ACAUAGGCUCUUUCAUUAACGGUAAUAGAAAAAAGUUAACAG GUAAAUAGUCAUUUUU CCC UG AUGUGUAGAGUG UGA A AUUCAUCCUUGAA G GUC A |||||||||||||||| ||| || |||||||||||| ||| | ||||||||||||| | ||| CAUUUAUCAGUAAAAG GGG AC UACACAUUUCAU ACU U UAAGUAGGGACUU A AGU U CC CA - C A G A UCUACUUUU - UUAAAAUCAAGGGCUCUCACUUUUUCAUGUUGUUUAGAUAGG |
| Stem-loop sequence | GUAAAUAGUCAUUUUUACCCAUGAAUGUGUAGAGUGCUGAGAAAUUCAUCCUUGAAUGUGUCACAUAGGCUCUUUCAUUAACGGUAAUAGAAAAAAGUUAACAGAUGGAUAGAUUUGUUGUACUUUUUCACUCUCGGGAACUAAAAUUUGAAUUUUCAUCUUUCAGGGAUGAAUAUGUCAAUACUUUACACAUCCAGGGACGAAAAUGACUAUUUACCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_006606160.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized protein ycf37-like (LOC100800455), transcript variant X2, mRNA | uncharacterized protein ycf37-like(LOC100800455) | coding protein | psRNATarget | |||||||||
| XM_014773004.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized protein ycf37-like (LOC100800455), transcript variant X1, mRNA | uncharacterized protein ycf37-like(LOC100800455) | coding protein | psRNATarget |