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BaseInfo

ncRNA ID novel_gma_miR5488
Species Glycine max
Class miRNA
Genome position Chr18:30572277-30572331 [-]
Reference genome Glycine_max_v2.0
Source SRR835761
Length 24
Mature sequence(if miRNA) 32 - AUCACAUAAGAACUCCAUAGUUAA - 55
Stem-loop(if miRNA) --   A     GA      U       U
  AUC CAUAA  ACUCCA AGUUAAG G
  ||| |||||  |||||| |||||||
  UAG GUAUU  UGAGGU UCAAUUC U
GG   G     AA      -       G
Stem-loop sequence AUCACAUAAGAACUCCAUAGUUAAGUGUGCUUAACUUGGAGUAAUUAUGGGAUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094641.1
ncRNA:24   AAUUGAUACCUCAAGAAUACACUA   1
  **||*|||*||||||||*||||||
targets:22   GAAAGUAUUGAGUUCUUUUGUGAU   45

2.5 Soybean clone JCVI-FLGm-5L2 unknown mRNA NA coding protein psRNATarget