ncRNA ID | novel_gma_miR5472 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:5699798-5699881 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835761 |
Length | 22 |
Mature sequence(if miRNA) | 63 - CAGAGACUAAAAGAGAAUUAAA - 84 |
Stem-loop(if miRNA) |
----UAA               GAAUCAUAA    AUAAAAAUU        UUUUUUUAGUCUCUG         AAUU         A        |||||||||||||||         ||||        GAGAAAAUCAGAGAC         UUUU         A AAAUUAA               --AUUAAAA    CACUAGAAA |
Stem-loop sequence | UAAUUUUUUUAGUCUCUGGAAUCAUAAAAUUAUAAAAAUUAAAAAGAUCACUUUUAAAAUUACAGAGACUAAAAGAGAAUUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006577048.2 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget | |||||||||
XM_014773932.1 |
|
1.0 | PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA | uncharacterized LOC100819268(LOC100819268) | coding protein | psRNATarget |