ncRNA ID | novel_gma_miR5471 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:4487582-4487686 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835761;SRR835762 |
Length | 19 |
Mature sequence(if miRNA) | 87 - AGCUGUUGAGUCUGAUCGA - 105 |
Stem-loop(if miRNA) |
--        GG         AAAUGA      U  -CAU    -UAU   U  UU   GGUCAGAC  CAAUGGUUG      AGAAUG GA    AUAA    AUG AG  C   ||||||||  |||||||||      |||||| ||    ||||    ||| ||  U   CUAGUCUG  GUUGUCGAU      UCUUAC CU    UAUU    UAC UC  C AG        -A         ----AA      C  UUUU    UUUC   -  UU |
Stem-loop sequence | GGUCAGACGGCAAUGGUUGAAAUGAAGAAUGUGACAUAUAAUAUAUGUAGUUCUCUUCUCAUCUUUUUAUUUUUUCCCAUUCUAAUAGCUGUUGAGUCUGAUCGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT099483.1 |
|
3.0 | Soybean clone JCVI-FLGm-13J2 unknown mRNA | NA | coding protein | psRNATarget |