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BaseInfo

ncRNA ID novel_gma_miR5471
Species Glycine max
Class miRNA
Genome position Chr14:4487582-4487686 [+]
Reference genome Glycine_max_v2.0
Source SRR835761;SRR835762
Length 19
Mature sequence(if miRNA) 87 - AGCUGUUGAGUCUGAUCGA - 105
Stem-loop(if miRNA) --        GG         AAAUGA      U  -CAU    -UAU   U  UU
  GGUCAGAC  CAAUGGUUG      AGAAUG GA    AUAA    AUG AG  C
  ||||||||  |||||||||      |||||| ||    ||||    ||| ||  U
  CUAGUCUG  GUUGUCGAU      UCUUAC CU    UAUU    UAC UC  C
AG        -A         ----AA      C  UUUU    UUUC   -  UU
Stem-loop sequence GGUCAGACGGCAAUGGUUGAAAUGAAGAAUGUGACAUAUAAUAUAUGUAGUUCUCUUCUCAUCUUUUUAUUUUUUCCCAUUCUAAUAGCUGUUGAGUCUGAUCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT099483.1
ncRNA:19   AGCUAGUCUGAGUUGUCGA   1
  ||*|*|||||||||||||*
targets:792   UCCAGCAGACUCAACAGCA   810

3.0 Soybean clone JCVI-FLGm-13J2 unknown mRNA NA coding protein psRNATarget