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BaseInfo

ncRNA ID novel_gma_miR5470
Species Glycine max
Class miRNA
Genome position Chr14:22262018-22262108 [+]
Reference genome Glycine_max_v2.0
Source SRR835761
Length 22
Mature sequence(if miRNA) 70 - UUUUUGGAUUUGUUUGGAUAUU - 91
Stem-loop(if miRNA) --A        C         UAAAAAUCAAAAACCACUCAAAAA
   AUCCAAAC GAUCCAAAA                        A
   |||||||| |||||||||                        A
   UAGGUUUG UUAGGUUUU                        C
UUA        U         UCUCGACCAAACCAAACCAAAAAU
Stem-loop sequence AAUCCAAACCGAUCCAAAAUAAAAAUCAAAAACCACUCAAAAAAACUAAAAACCAAACCAAACCAGCUCUUUUUGGAUUUGUUUGGAUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006581624.2
ncRNA:22   UUAUAGGUUUGUUUAGGUUUUU   1
  =*|*||||||||||||||=|||
targets:1011   GUUUUCCAAACAAAUCCAGAAA   1032

2.5 PREDICTED: Glycine max uncharacterized LOC100776590 (LOC100776590), transcript variant X3, mRNA uncharacterized LOC100776590(LOC100776590) coding protein psRNATarget
XM_003535188.3
ncRNA:22   UU---AUAGGU-UUGUUUAGGUUUUU   1
  ||---||||||-=|||||||||||||
targets:1522   AAGUUUAUCCAUGACAAAUCCAAAAA   1547

3.0 PREDICTED: Glycine max uncharacterized LOC100807303 (LOC100807303), mRNA uncharacterized LOC100807303(LOC100807303) coding protein psRNATarget