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BaseInfo

ncRNA ID novel_gma_miR5461
Species Glycine max
Class miRNA
Genome position Chr1:8420826-8420880 [-]
Reference genome Glycine_max_v2.0
Source SRR835759;SRR835761;SRR835768;SRR835770
Length 21
Mature sequence(if miRNA) 1 - UGGCACUAAAGGAUGACGUGA - 21
Stem-loop(if miRNA) --AG    -A              -  A
    GUCA  UUUUAGUGCCACGU GG C
    ||||  |||||||||||||| || U
    CAGU  GAAAUCACGGUGCA CC A
AGUG    AG              A  U
Stem-loop sequence AGGUCAAUUUUAGUGCCACGUGGACUAUCCAACGUGGCACUAAAGGAUGACGUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538749.3
ncRNA:21   AGUGCAGUAGGAAAUCACGGU   1
  |||||*|||*|||||||||||
targets:1445   UCACGCCAUACUUUAGUGCCA   1465

2.5 PREDICTED: Glycine max subtilisin-like protease SBT1.7 (LOC100801866), mRNA subtilisin-like protease SBT1.7(LOC100801866) coding protein psRNATarget