| ncRNA ID |
novel_gma_miR5459 |
| Species |
Glycine max |
| Class |
miRNA |
| Genome position |
Chr9:27308828-27309048 [-] |
| Reference genome |
Glycine_max_v2.0 |
| Source |
SRR835759;SRR835762;SRR835766;SRR835771;SRR835773;SRR1451615;SRR1451617
|
| Length |
22 |
| Mature sequence(if miRNA) |
1 - CAAUUUCGAGCGUUUUGACAUA - 22 |
| Stem-loop(if miRNA) |
-- CA AAUA -CGCUA U ---UG UUU UUAU -UAAUG C GGUUA
UGUCAAAAUGCUCGAAAUUGAA AGGAGUCCCCUGACAAA UCACA GUUA UUU UUCAAG UG UCUCUAA GAAAAAU GGGU A
|||||||||||||||||||||| ||||||||||||||||| ||||| |||| ||| |||||| || ||||||| ||||||| |||| A
ACAGUUUUGCGAGCUUUAACUU UCCUUAGGGGAUUGUUU AGUGU CAGU GAG AGGUUU AC AGAGAUU CUUUUUA CCUA U
AU AC ---A UUAUAC U UAAAA UUU ---- CAUCCA U AAUUC
|
| Stem-loop sequence |
UGUCAAAAUGCUCGAAAUUGAACAAGGAGUCCCCUGACAAAAAUAUCACACGCUAGUUAUUUUUGUUCAAGUUUUGUUAUUCUCUAAUAAUGGAAAAAUCGGGUGGUUAAAUCUUAAAUCCUAUUUUUCACCUACUUAGAGACAUUUUUUGGAAAAAUGAGUUGACCAUAUUUGUGAAUUUGUUAGGGGAUUCCUCAUUCAAUUUCGAGCGUUUUGACAUA
|