Search result

BaseInfo

ncRNA ID novel_gma_miR5454
Species Glycine max
Class miRNA
Genome position Chr8:25820427-25820587 [-]
Reference genome Glycine_max_v2.0
Source SRR835759
Length 21
Mature sequence(if miRNA) 1 - AGAACCUAUCCGAUGUCGGCC - 21
Stem-loop(if miRNA) --          C    G   UU   AA  A           G  -UU        AAC   GACCUAAAAACUUCUAACAG
  CCGACAUCGG UAGG UCU  UCG  CG CAUUGACCAAG CU   UUUUAGCC   GUC                    G
  |||||||||| |||| |||  |||  || ||||||||||| ||   ||||||||   |||                    C
  GGCUGUAGCC AUCC AGA  AGU  GC GUAGCUGGUUC GA   AAAAUCGG   AUA                    G
CC          U    A   -U   CA  C           -  UAU        -CU   ACCUAUCUAAAAAAACAGUU
Stem-loop sequence CCGACAUCGGCUAGGGUCUUUUCGAACGACAUUGACCAAGGCUUUUUUUAGCCAACGUCGACCUAAAAACUUCUAACAGGCGUUGACAAAAAAAUCUAUCCAAUAUCGGCUAAAAUAUAGCUUGGUCGAUGCCGACUGAUAGAACCUAUCCGAUGUCGGCC