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BaseInfo

ncRNA ID novel_gma_miR5451
Species Glycine max
Class miRNA
Genome position Chr14:31456499-31456647 [-]
Reference genome Glycine_max_v2.0
Source SRR1295517
Length 24
Mature sequence(if miRNA) 1 - AGGAGAAUUGAUGUCGUAUGGUGC - 24
Stem-loop(if miRNA) --    -  A           A  -C    C      AU    A     GCAAAUAACAAAAAAAAAACA  G    CAG     CA
  ACUA AC ACAUCAAUUCU CC  AAAA CGAUGU  UGUA UAGUA                     UA ACGA   CGGUU  G
  |||| || ||||||||||| ||  |||| ||||||  |||| |||||                     || ||||   |||||  C
  UGGU UG UGUAGUUAAGA GG  UUUU GUUACA  ACAU AUCAU                     AU UGUU   GCCAA  C
CG    A  C           -  AC    A      --    -     --------------------G  G    AUA     AA
Stem-loop sequence ACUAACAACAUCAAUUCUACCCAAAACCGAUGUAUUGUAAUAGUAGCAAAUAACAAAAAAAAAACAUAGACGACAGCGGUUCAGCCAAAACCGAUAUUGUGUAGUACUAUACAACAUUGAUUUUCAGGAGAAUUGAUGUCGUAUGGUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098092.1
ncRNA:24   CGUGGUAUGCUGUAGUUAAGAGGA   1
  *|||*|*||*=|||||||||||||
targets:109   UCACAACACAGCAUCAAUUCUCCU   132

3.0 Soybean clone JCVI-FLGm-12C1 unknown mRNA NA coding protein psRNATarget