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BaseInfo

ncRNA ID novel_gma_miR5446
Species Glycine max
Class miRNA
Genome position Chr7:25593707-25593845 [-]
Reference genome Glycine_max_v2.0
Source SRR835759
Length 21
Mature sequence(if miRNA) 119 - CAUAAAAGGCUUACGGAUCAA - 139
Stem-loop(if miRNA) --CA     GG    C       C     CC                    C            CUUAA
    UAAAA  CUUA GGAUCAA UUGAU  GUAAGCCUUUUACGGAUCAA UUGAUUCGUAUG     A
    |||||  |||| ||||||| |||||  |||||||||||||||||||| ||||||||||||     A
    AUUUU  GAAU CCUAGUU AACUA  CAUUCGGAAAAUGCCUAGUU AACUAAGCAUAC     U
AAGC     AG    A       C     UA                    U            AACUA
Stem-loop sequence CAUAAAAGGCUUACGGAUCAACUUGAUCCGUAAGCCUUUUACGGAUCAACUUGAUUCGUAUGCUUAAAAUAUCAACAUACGAAUCAAUUUGAUCCGUAAAAGGCUUACAUAUCAACUUGAUCCAUAAGGAUUUUACGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524153.3
ncRNA:21   AACUAGGCAUUCGGAAAAUAC   1
  |||||||||||*|||||||||
targets:245   UUGAUCCGUAAACCUUUUAUG   265

1.5 PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA uncharacterized LOC100805437(LOC100805437) coding protein psRNATarget