Search result

BaseInfo

ncRNA ID novel_gma_miR5436
Species Glycine max
Class miRNA
Genome position Chr6:46893676-46893776 [+]
Reference genome Glycine_max_v2.0
Source SRR835759
Length 24
Mature sequence(if miRNA) 1 - AAAAUAACAACAGCGGGAGAACCU - 24
Stem-loop(if miRNA) --                               -UG   U          A
  AAAAUAACAACAGCGGGAGAACCUUCUUCCG   GAU CUUGCGGAAG A
  |||||||||||||||||||||||||||||||   ||| |||||||||| G
  UUUUAUUGUUGUCGCCUUCUUGGAAGAAGGU   CUA GAGCGCCUUC U
AC                               GUA   -          U
Stem-loop sequence AAAAUAACAACAGCGGGAGAACCUUCUUCCGUGGAUUCUUGCGGAAGAAGUUCUUCCGCGAGAUCAUGUGGAAGAAGGUUCUUCCGCUGUUGUUAUUUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524697.3
ncRNA:24   UCCAAGAGGGCGACAACAAUAAAA   1
  |**||||*||||||*|||||||||
targets:1755   AUCUUCUACCGCUGAUGUUAUUUU   1778

2.5 PREDICTED: Glycine max 3',5'-nucleoside bisphosphate phosphatase-like (LOC100808268), mRNA 3',5'-nucleoside bisphosphate phosphatase-like(LOC100808268) coding protein psRNATarget