ncRNA ID | novel_gma_miR5422 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:28840902-28840999 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835759;SRR835767;SRR835771;SRR835773 |
Length | 22 |
Mature sequence(if miRNA) | 77 - UUGGAUACAAGGAUAGAAGUGU - 98 |
Stem-loop(if miRNA) |
--           GA       G     A        -----      A GC   UUGGAUACAAG  UAGAAGU UUUUU AGAGCUUU     UGGAAA A  U   |||||||||||  ||||||| ||||| ||||||||     |||||| |   AACCUAUGUUC  GUCUUCA GAAAA UCUCGAAG     ACCUUU U  A CA           -A       A     C        AGAUA      A AU |
Stem-loop sequence | UUGGAUACAAGGAUAGAAGUGUUUUUAAGAGCUUUUGGAAAAAGCUAUAUAUUUCCAAUAGAGAAGCUCUCAAAAGAACUUCUGACUUGUAUCCAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003552549.3 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100782214 (LOC100782214), mRNA | uncharacterized LOC100782214(LOC100782214) | coding protein | psRNATarget | |||||||||
XM_006578927.2 |
|
1.5 | PREDICTED: Glycine max auxin response factor 17-like (LOC102662128), mRNA | auxin response factor 17-like(LOC102662128) | coding protein | psRNATarget |