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BaseInfo

ncRNA ID novel_gma_miR5421
Species Glycine max
Class miRNA
Genome position Chr3:5341933-5341993 [+]
Reference genome Glycine_max_v2.0
Source SRR835759;SRR835763;SRR835765;SRR835766;SRR835771
Length 22
Mature sequence(if miRNA) 40 - UCUUAAAAUGGGCAGAUUUCUA - 61
Stem-loop(if miRNA) --        G -   C           U  
  GAAAUCUG U AUU UAAGACGGGUU GGA
  |||||||| | ||| ||||||||||| ||U
  CUUUAGAC G UAA AUUCUGUCCAA CCA
AU        G G   A           -  
Stem-loop sequence GAAAUCUGGUAUUCUAAGACGGGUUUGGAUACCAACCUGUCUUAAAAUGGGCAGAUUUCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773264.1
ncRNA:22   AUCUUUAGACGGGUAAAAUUCU   1
  ***|||||||||||||*|||||
targets:1166   GUCAAAUCUGCCCAUUCUAAGA   1187

1.5 PREDICTED: Glycine max E3 ubiquitin-protein ligase CHIP-like (LOC100798587), mRNA E3 ubiquitin-protein ligase CHIP-like(LOC100798587) coding protein psRNATarget