| ncRNA ID | novel_gma_miR5420 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr3:37614203-37614398 [-] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR835759 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UAGAGAGUGUGUUGUUGGCAU - 21 |
| Stem-loop(if miRNA) |
-- UG A G U A CCAUUAUU UAAAACUUA U C CCUGA -AA - AAA GC GCAACACACUCUUUAACA AUU U UCUAACA ACUUU GCU UUG AAA UACAAAAU GUG GUC CAUU U || |||||||||||||||||| ||| | ||||||| ||||| ||| ||| ||| |||||||| ||| ||| |||| CG UGUUGUGUGAGAGAUUGU UAA A AGAUUGU UGAGA CGA AAC UUU AUGUUUUA CAC CAG GUGA A UA GU C G C G -UGACAAU -CUGUAAAC C A ----A GUC A GGA |
| Stem-loop sequence | GCUGGCAACACACUCUUUAACAAAUUGUUUCUAACAAACUUUCCAUUAUUGCUUAAAACUUAUUGUAAACUACAAAAUCCUGAGUGAAGUCCAUUAAAUAAGGAGUGAGACCUGCACAAUUUUGUAAUUUCCAACAAAUGUCAGCUAACAGUAGAGUGUGUUAGACAGAAUCUGUUAGAGAGUGUGUUGUUGGCAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK244703.1 |
|
3.0 | Glycine max cDNA, clone: GMFL01-10-P12 | NA | coding protein | psRNATarget | |||||||||
| XM_003535759.3 |
|
3.0 | PREDICTED: Glycine max protein YLS9-like (LOC100787531), mRNA | protein YLS9-like(LOC100787531) | coding protein | psRNATarget | |||||||||
| XM_003539497.2 |
|
3.0 | PREDICTED: Glycine max tropinone reductase (LOC100780806), mRNA | tropinone reductase(LOC100780806) | coding protein | psRNATarget |