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BaseInfo

ncRNA ID	novel_gma_miR5417
Species	Glycine max
Class	miRNA
Genome position	Chr2:36725648-36725724 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835759;SRR835771;SRR835772
Length	24
Mature sequence(if miRNA)	54 - AAAGGCUAGAAGAAGGAGAAACAA - 77
Stem-loop(if miRNA)	--     CU        G     CAAGCAU  A   UC U   AAAGG  AGAAGAAG AGAAA       UG GAG  A U   |||||  |||||||| |||||       || |||  | C   UUUCC  UCUUCUUU UCUUU       AC CUC  U C CA     CU        -     --CCUUU  -   CC U
Stem-loop sequence	AAAGGCUAGAAGAAGGAGAAACAAGCAUUGAGAGUCAUUCCUUCCCUCCAUUUCCUUUCUUUUCUUCUUCCCUUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006574908.2	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   ||*|||||*||||||||||||||* targets:592   UUCUUUCUGCUUCUUCUAGCCUUC   615 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49 (LOC100783810), transcript variant X6, mRNA	transcription factor bHLH49(LOC100783810)	coding protein	psRNATarget
XM_006574909.2	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   ||*|||||*||||||||||||||* targets:587   UUCUUUCUGCUUCUUCUAGCCUUC   610 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49 (LOC100783810), transcript variant X1, mRNA	transcription factor bHLH49(LOC100783810)	coding protein	psRNATarget
XM_006574910.2	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   ||*|||||*||||||||||||||* targets:579   UUCUUUCUGCUUCUUCUAGCCUUC   602 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49 (LOC100783810), transcript variant X2, mRNA	transcription factor bHLH49(LOC100783810)	coding protein	psRNATarget
XM_006574911.2	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   ||*|||||*||||||||||||||* targets:573   UUCUUUCUGCUUCUUCUAGCCUUC   596 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49 (LOC100783810), transcript variant X3, mRNA	transcription factor bHLH49(LOC100783810)	coding protein	psRNATarget
XM_014766788.1	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   ||*|||||*||||||||||||||* targets:568   UUCUUUCUGCUUCUUCUAGCCUUC   591 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49 (LOC100783810), transcript variant X4, mRNA	transcription factor bHLH49(LOC100783810)	coding protein	psRNATarget
XM_006574912.2	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   ||*|||||*||||||||||||||* targets:560   UUCUUUCUGCUUCUUCUAGCCUUC   583 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49 (LOC100783810), transcript variant X5, mRNA	transcription factor bHLH49(LOC100783810)	coding protein	psRNATarget
XM_006574913.2	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   ||*|||||*||||||||||||||* targets:593   UUCUUUCUGCUUCUUCUAGCCUUC   616 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49 (LOC100783810), transcript variant X7, mRNA	transcription factor bHLH49(LOC100783810)	coding protein	psRNATarget
XM_014773835.1	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   *|*|||||*||||||||||||||* targets:702   CUCUUUCUGCUUCUUCUAGCCUUC   725 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49-like (LOC100797720), transcript variant X5, mRNA	transcription factor bHLH49-like(LOC100797720)	coding protein	psRNATarget
XM_014773835.1	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   *|*|||||*||||||||||||||* targets:929   CUCUUUCUGCUUCUUCUAGCCUUC   952 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49-like (LOC100797720), transcript variant X5, mRNA	transcription factor bHLH49-like(LOC100797720)	coding protein	psRNATarget
XM_014773827.1	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   *|*|||||*||||||||||||||* targets:782   CUCUUUCUGCUUCUUCUAGCCUUC   805 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49-like (LOC100797720), transcript variant X2, mRNA	transcription factor bHLH49-like(LOC100797720)	coding protein	psRNATarget
XM_014773827.1	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   *|*|||||*||||||||||||||* targets:1009   CUCUUUCUGCUUCUUCUAGCCUUC   1032 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49-like (LOC100797720), transcript variant X2, mRNA	transcription factor bHLH49-like(LOC100797720)	coding protein	psRNATarget
XM_014773825.1	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   *|*|||||*||||||||||||||* targets:771   CUCUUUCUGCUUCUUCUAGCCUUC   794 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49-like (LOC100797720), transcript variant X1, mRNA	transcription factor bHLH49-like(LOC100797720)	coding protein	psRNATarget
XM_014773825.1	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   *|*|||||*||||||||||||||* targets:998   CUCUUUCUGCUUCUUCUAGCCUUC   1021 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49-like (LOC100797720), transcript variant X1, mRNA	transcription factor bHLH49-like(LOC100797720)	coding protein	psRNATarget
XM_006573122.2	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   *|*|||||*||||||||||||||* targets:702   CUCUUUCUGCUUCUUCUAGCCUUC   725 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49-like (LOC100797720), transcript variant X6, mRNA	transcription factor bHLH49-like(LOC100797720)	coding protein	psRNATarget
XM_006573122.2	ncRNA:24   AACAAAGAGGAAGAAGAUCGGAAA   1   *|*|||||*||||||||||||||* targets:929   CUCUUUCUGCUUCUUCUAGCCUUC   952 Target Full Sequence	2.0	PREDICTED: Glycine max transcription factor bHLH49-like (LOC100797720), transcript variant X6, mRNA	transcription factor bHLH49-like(LOC100797720)	coding protein	psRNATarget
XM_006587227.2	ncRNA:24   AACAAAGA-GGAAGAAGAUCGGAAA   1   ***|||||-|||||||||||||||* targets:171   ACUUUUCUUCCUUCUUCUAGCCUUC   195 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100778226 (LOC100778226), mRNA	uncharacterized LOC100778226(LOC100778226)	coding protein	psRNATarget