ncRNA ID | novel_gma_miR5414 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:25268901-25269046 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835759;SRR835765;SRR835767 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUGAGAAUUCUAAGAUGGUUU - 24 |
Stem-loop(if miRNA) |
AAU      --           GU      G                   CAA        A UC      UA    GUGAGA  AUUCUAAGAUG  UUUUAA UAAACACCGUCGUAGAGUG   UCAUUCAA G  GGUUUU  A    ||||||  |||||||||||  |||||| |||||||||||||||||||   |||||||| |  ||||||    UACUCU  UAAGAUUCUGC  AAAAUU AUUUGUGGUAGCAUCUUAC   GGUAAGUU C  CCAAAA  G ACU      GG           UG      G                   CAC        G UA      UU |
Stem-loop sequence | AAUGUGAGAAUUCUAAGAUGGUUUUUAAGUAAACACCGUCGUAGAGUGCAAUCAUUCAAAGUCGGUUUUUAAGUUAAAACCAUCGUUGAAUGGCACCAUUCUACGAUGGUGUUUAGUUAAAAGUCGUCUUAGAAUGGUCUCAUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766083.1 |
|
3.0 | PREDICTED: Glycine max oxysterol-binding protein-related protein 3C-like (LOC100792007), transcript variant X1, mRNA | oxysterol-binding protein-related protein 3C-like(LOC100792007) | coding protein | psRNATarget |