ncRNA ID | novel_gma_miR5413 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:7887174-7887243 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835759 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACUACUUCUGGAAGAACGUCAU - 24 |
Stem-loop(if miRNA) |
--  ACC            A   A   --          GA   UUCUUCCGGAAG AGU UUU  GUGAUUUC   ||   |||||||||||| ||| |||  |||||||C   CU   AAGAAGGUCUUC UCA AGA  CAUUAAGG UA  -GC            A   A   CU        |
Stem-loop sequence | GAACCUUCUUCCGGAAGAAGUAUUUGUGAUUUCCGGAAUUACUCAGAAACUACUUCUGGAAGAACGUCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT093307.1 |
|
2.5 | Soybean clone JCVI-FLGm-17I17 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003535040.3 |
|
2.5 | PREDICTED: Glycine max ADP-ribosylation factor GTPase-activating protein AGD12 (LOC100790876), mRNA | ADP-ribosylation factor GTPase-activating protein AGD12(LOC100790876) | coding protein | psRNATarget |