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BaseInfo

ncRNA ID novel_gma_miR5413
Species Glycine max
Class miRNA
Genome position Chr2:7887174-7887243 [-]
Reference genome Glycine_max_v2.0
Source SRR835759
Length 24
Mature sequence(if miRNA) 1 - AAACUACUUCUGGAAGAACGUCAU - 24
Stem-loop(if miRNA) --  ACC            A   A   --       
  GA   UUCUUCCGGAAG AGU UUU  GUGAUUUC
  ||   |||||||||||| ||| |||  |||||||C
  CU   AAGAAGGUCUUC UCA AGA  CAUUAAGG
UA  -GC            A   A   CU       
Stem-loop sequence GAACCUUCUUCCGGAAGAAGUAUUUGUGAUUUCCGGAAUUACUCAGAAACUACUUCUGGAAGAACGUCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT093307.1
ncRNA:24   UACUGCAAGAAGGUCUUCAUCAAA   1
  ||*|*|||||*|||*|||||||||
targets:609   AUCAAGUUCUGCCAAAAGUAGUUU   632

2.5 Soybean clone JCVI-FLGm-17I17 unknown mRNA NA coding protein psRNATarget
XM_003535040.3
ncRNA:24   UACUGCAAGAAGGUCUUCAUCAAA   1
  ||*|*|||||*|||*|||||||||
targets:651   AUCAAGUUCUGCCAAAAGUAGUUU   674

2.5 PREDICTED: Glycine max ADP-ribosylation factor GTPase-activating protein AGD12 (LOC100790876), mRNA ADP-ribosylation factor GTPase-activating protein AGD12(LOC100790876) coding protein psRNATarget