ncRNA ID | novel_gma_miR5412 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:3699403-3699516 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295517;SRR1294477 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACCACUGAAAGGUCAUCCGGAAG - 24 |
Stem-loop(if miRNA) |
--           G   A        A  CCU      A   U U           C   AACCACUGAAA GUC UCCGGAAG AC   UCUUCC GAA G UUCCGGAAGAA C   ||||||||||| ||| |||||||| ||   |||||| ||| | |||||||||||   UUGGUGACUUU CAG AGGUCUUC UG   AGAAGG CUU C AAGGCCUUCUU A CU           G   A        A  ACC      C   U C           C |
Stem-loop sequence | AACCACUGAAAGGUCAUCCGGAAGAACCCUUCUUCCAGAAUGUUUCCGGAAGAACCACUUCUUCCGGAACCUUUCCGGAAGACCAGUACUUCUGGAAGACGUUUCAGUGGUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001317692.1 |
|
2.5 | Glycine max sugar phosphatase YfbT-like (LOC100798181), mRNA | sugar phosphatase YfbT-like(LOC100798181) | coding protein | psRNATarget | |||||||||
BT096038.1 |
|
2.5 | Soybean clone JCVI-FLGm-25O18 unknown mRNA | NA | coding protein | psRNATarget |