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BaseInfo

ncRNA ID novel_gma_miR5409
Species Glycine max
Class miRNA
Genome position Chr20:47769104-47769160 [-]
Reference genome Glycine_max_v2.0
Source SRR835759
Length 21
Mature sequence(if miRNA) 37 - UUUCUUUUAGUCCUCUAGUUU - 57
Stem-loop(if miRNA) --              -C       UAUU
  UUUCUUUUAGUCCU  UAGUUUA    U
  ||||||||||||||  |||||||
  AGAGAAAAUUAGGA  AUCAAAU    U
UA              AU       UUAA
Stem-loop sequence UUUCUUUUAGUCCUCUAGUUUAUAUUUUAAUUUAAACUAUAAGGAUUAAAAGAGAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003520477.3
ncRNA:21   UUUGAUCUCCUGAUUUUCUUU   1
  *||||||||*||||||||||*
targets:2686   CAACUAGAGCACUAAAAGAAC   2706

2.5 PREDICTED: Glycine max oligopeptide transporter 5-like (LOC100820498), mRNA oligopeptide transporter 5-like(LOC100820498) coding protein psRNATarget