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BaseInfo

ncRNA ID	novel_gma_miR5408
Species	Glycine max
Class	miRNA
Genome position	Chr20:26173545-26173590 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835759
Length	21
Mature sequence(if miRNA)	1 - CUUGAAGGAGAUGGUGGGCUU - 21
Stem-loop(if miRNA)	-C   AA       - UG    U   UUG  GGAGAUG G  GGCU U   |||  ||||||| |  ||||   GAC  CCUCUAC C  UCGG U GC   AC       U CU    G
Stem-loop sequence	CUUGAAGGAGAUGGUGGGCUUUUGGGCUUCCUCAUCUCCCACAGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014764200.1	ncRNA:21   UUCGGGUGGUAGAGGAAGUUC   1   ||||||||||||||||||||| targets:87   AAGCCCACCAUCUCCUUCAAG   107 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC102665503 (LOC102665503), transcript variant X1, mRNA	uncharacterized LOC102665503(LOC102665503)	coding protein	psRNATarget
XM_006594141.2	ncRNA:21   UUCGGGUGGUAGAGGAAGUUC   1   ||||||||||||||||||||| targets:87   AAGCCCACCAUCUCCUUCAAG   107 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC102665503 (LOC102665503), transcript variant X2, mRNA	uncharacterized LOC102665503(LOC102665503)	coding protein	psRNATarget
XM_014764201.1	ncRNA:21   UUCGGGUGGUAGAGGAAGUUC   1   ||||||||||||||||||||| targets:87   AAGCCCACCAUCUCCUUCAAG   107 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC102665503 (LOC102665503), transcript variant X5, mRNA	uncharacterized LOC102665503(LOC102665503)	coding protein	psRNATarget
XM_003545293.3	ncRNA:21   UUCGGGUGGUAGAGGAAGUUC   1   ||||||=|||||||||||||| targets:464   AAGCCCGCCAUCUCCUUCAAG   484 Target Full Sequence	1.0	PREDICTED: Glycine max F-box protein At3g12350-like (LOC100799602), mRNA	F-box protein At3g12350-like(LOC100799602)	coding protein	psRNATarget
XM_014767663.1	ncRNA:21   UUCGGGUGGUAGAGGAAGUUC   1   ||*|||||||||||||||||| targets:4629   AAACCCACCAUCUCCUUCAAG   4649 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC100808159 (LOC100808159), mRNA	uncharacterized LOC100808159(LOC100808159)	coding protein	psRNATarget
XM_014761715.1	ncRNA:21   UUCGGGUGGUAGAGGAAGUUC   1   **|||||=|||||*||||||| targets:700   UUGCCCAUCAUCUGCUUCAAG   720 Target Full Sequence	2.5	PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC100792078), mRNA	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC100792078)	coding protein	psRNATarget