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BaseInfo

ncRNA ID novel_gma_miR5404
Species Glycine max
Class miRNA
Genome position Chr19:45785457-45785513 [-]
Reference genome Glycine_max_v2.0
Source SRR835759;SRR835762
Length 24
Mature sequence(if miRNA) 34 - AGUUAUUUAAAAACUGAUGUCGUU - 57
Stem-loop(if miRNA) --A            C      C  UAA
   GUUAUUUAAAAA UGAUGU GU   U
   |||||||||||| |||||| ||   C
   CAAUAAAUUUUU GCUACA CA   A
AGC            A      A  UUC
Stem-loop sequence AGUUAUUUAAAAACUGAUGUCGUUAAUCACUUACAACAUCGAUUUUUAAAUAACCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776578.1
ncRNA:24   UUGCUGUAGUCAAAAAUUUAUUGA   1
  *||*|||||||||||*|||||||*
targets:1629   UACAACAUCAGUUUUCAAAUAACC   1652

2.5 PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA ankyrin repeat and SOCS box protein 7-like(LOC100786031) coding protein psRNATarget
BT094629.1
ncRNA:24   UUG--CUGUAGUCAAAAAUUUAUUGA   1
  *||--||=||*|*|||||||||||||
targets:59   UACAGGAUAUAAUUUUUUAAAUAACU   84

3.0 Soybean clone JCVI-FLGm-5J2 unknown mRNA NA coding protein psRNATarget