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BaseInfo

ncRNA ID	novel_gma_miR5402
Species	Glycine max
Class	miRNA
Genome position	Chr1:41629929-41630040 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835759
Length	23
Mature sequence(if miRNA)	1 - UACAAGAGCAGUGGGCAUGUAGU - 23
Stem-loop(if miRNA)	--                            -     CUGA     UACGAAGAAACG   UACAUGCCCACUGCUCUUGUAUAUUUUA UUUGA    UUCUU            A   |||||||||||||||||||||||||||| |||||    |||||            A   AUGUACGGGUGACGAGAACAUAUAAAAU GAAUU    UUUUU            G UG                            U     --UA     UAUCCUUAAGAA
Stem-loop sequence	UACAUGCCCACUGCUCUUGUAUAUUUUAUUUGACUGAUUCUUUACGAAGAAACGAAGAAGAAUUCCUAUUUUUUAUUUAAGUUAAAAUAUACAAGAGCAGUGGGCAUGUAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003543875.3	ncRNA:23   UGAUGUACGGGUGACGAGAACAU   1   *||*|||*|=||||||||||||* targets:477   UCUUCAUACUCACUGCUCUUGUU   499 Target Full Sequence	3.0	PREDICTED: Glycine max probable galacturonosyltransferase 13 (LOC100786907), transcript variant X1, mRNA	probable galacturonosyltransferase 13(LOC100786907)	coding protein	psRNATarget
XM_006593625.2	ncRNA:23   UGAUGUACGGGUGACGAGAACAU   1   *||*|||*|=||||||||||||* targets:503   UCUUCAUACUCACUGCUCUUGUU   525 Target Full Sequence	3.0	PREDICTED: Glycine max probable galacturonosyltransferase 13 (LOC100786907), transcript variant X3, mRNA	probable galacturonosyltransferase 13(LOC100786907)	coding protein	psRNATarget
XM_014765281.1	ncRNA:23   UGAUGUACGGGUGACGAGAACAU   1   *||*|||*|=||||||||||||* targets:518   UCUUCAUACUCACUGCUCUUGUU   540 Target Full Sequence	3.0	PREDICTED: Glycine max probable galacturonosyltransferase 13 (LOC100786907), transcript variant X2, mRNA	probable galacturonosyltransferase 13(LOC100786907)	coding protein	psRNATarget