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BaseInfo

ncRNA ID	novel_gma_miR5401
Species	Glycine max
Class	miRNA
Genome position	Chr19:39518362-39518427 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835759
Length	22
Mature sequence(if miRNA)	1 - CAAAGAUUUUUUUGGUCGUUGU - 22
Stem-loop(if miRNA)	--      UU  U       UU    UCCA  U   CAAAGA  UU UUGGUCG  GUCA    GG U   ||||||  || |||||||  ||||    || U   GUUUUU  AG AACUAGU  UAGU    CU U CG      UU  U       UG    -UGA  U
Stem-loop sequence	CAAAGAUUUUUUUGGUCGUUGUCAUCCAGGUUUUUUCAGUUGAUGUUGAUCAAUGAUUUUUUUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014768244.1	ncRNA:22   UGUUGCUGGUUUUUUUAGAAAC   1   *==||||||||||||*|||||| targets:71   UUGACGACCAAAAAACUCUUUG   92 Target Full Sequence	1.5	PREDICTED: Glycine max phosphatidylinositol 4-phosphate 5-kinase 7 (LOC100801603), transcript variant X5, mRNA	phosphatidylinositol 4-phosphate 5-kinase 7(LOC100801603)	coding protein	psRNATarget
XM_006597258.2	ncRNA:22   UGUUGCUGGUUUUUUUAGAAAC   1   *==||||||||||||*|||||| targets:71   UUGACGACCAAAAAACUCUUUG   92 Target Full Sequence	1.5	PREDICTED: Glycine max phosphatidylinositol 4-phosphate 5-kinase 7 (LOC100801603), transcript variant X4, mRNA	phosphatidylinositol 4-phosphate 5-kinase 7(LOC100801603)	coding protein	psRNATarget
XM_006597255.2	ncRNA:22   UGUUGCUGGUUUUUUUAGAAAC   1   *==||||||||||||*|||||| targets:71   UUGACGACCAAAAAACUCUUUG   92 Target Full Sequence	1.5	PREDICTED: Glycine max phosphatidylinositol 4-phosphate 5-kinase 7 (LOC100801603), transcript variant X2, mRNA	phosphatidylinositol 4-phosphate 5-kinase 7(LOC100801603)	coding protein	psRNATarget
XM_006597256.2	ncRNA:22   UGUUGCUGGUUUUUUUAGAAAC   1   *==||||||||||||*|||||| targets:71   UUGACGACCAAAAAACUCUUUG   92 Target Full Sequence	1.5	PREDICTED: Glycine max phosphatidylinositol 4-phosphate 5-kinase 7 (LOC100801603), transcript variant X3, mRNA	phosphatidylinositol 4-phosphate 5-kinase 7(LOC100801603)	coding protein	psRNATarget
NM_001249097.2	ncRNA:22   UGUUGCUGGUUUUUUUAGAAAC   1   **|||*||||||=||||||||| targets:540   UAAACUACCAAAGAAAUCUUUG   561 Target Full Sequence	2.5	Glycine max uncharacterized LOC100500298 (LOC100500298), mRNA	uncharacterized LOC100500298(LOC100500298)	coding protein	psRNATarget
BT091214.1	ncRNA:22   UGUUGCUGGUUUUUUUAGAAAC   1   **|||*||||||=||||||||| targets:543   UAAACUACCAAAGAAAUCUUUG   564 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-7M18 unknown mRNA	NA	coding protein	psRNATarget