ncRNA ID | novel_gma_miR5395 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:42736511-42736718 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835759 |
Length | 24 |
Mature sequence(if miRNA) | 185 - AGAGGGAACAUAAGUCAGGGUAGA - 208 |
Stem-loop(if miRNA) |
--             C                   A                                       C                   -----C    C   UACCCUGACUUAU UUCCUUCUUUGGAAGUGGC UCAUCCAAAUCUCUGUAGCCUGUAUCAAGUGAUCUGUUC UAGUCAGGUUCACAUCAUC      CGUC A   ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||      |||| A   AUGGGACUGAAUA AAGGGAGAAACCUUCACCG AGUAGGUUUAGAGACAUCGGACAUGGUUCGCUAGGCAAG AUCGGUCCAAGUGUAGUAG      GUAG C AG             C                   C                                       C                   ACCAUA    U |
Stem-loop sequence | UACCCUGACUUAUCUUCCUUCUUUGGAAGUGGCAUCAUCCAAAUCUCUGUAGCCUGUAUCAAGUGAUCUGUUCCUAGUCAGGUUCACAUCAUCCCGUCCAACUGAUGAUACCAGAUGAUGUGAACCUGGCUACGAACGGAUCGCUUGGUACAGGCUACAGAGAUUUGGAUGACGCCACUUCCAAAGAGGGAACAUAAGUCAGGGUAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003556724.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100806502 (LOC100806502), mRNA | uncharacterized LOC100806502(LOC100806502) | coding protein | psRNATarget |