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BaseInfo

ncRNA ID novel_gma_miR5388
Species Glycine max
Class miRNA
Genome position Chr17:8133854-8133941 [+]
Reference genome Glycine_max_v2.0
Source SRR835759
Length 22
Mature sequence(if miRNA) 1 - UUAAUUCUCAAAAGGUCUCUGC - 22
Stem-loop(if miRNA) --                       A     -AUUC       A
  UUAAUUCUCAAAAGGUCUCUGCC UUAAA     UUUAACU A
  ||||||||||||||||||||||| |||||     ||||||| C
  AAUUAAGGGUUUUCCAGAGACGG AAUUU     AAAUUGA G
AA                       C     AAAAA       G
Stem-loop sequence UUAAUUCUCAAAAGGUCUCUGCCAUUAAAAUUCUUUAACUAACGGAGUUAAAAAAAAUUUAACGGCAGAGACCUUUUGGGAAUUAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT098098.1
ncRNA:22   CGUCUCUGGAAAACUCUUAA-UU   1
  ***|||||||||||||||||-||
targets:1044   AAUGAGACCUUUUGAGAAUUCAA   1066

3.0 Soybean clone JCVI-FLGm-22L22 unknown mRNA NA coding protein psRNATarget