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BaseInfo

ncRNA ID novel_gma_miR5384
Species Glycine max
Class miRNA
Genome position Chr17:21326133-21326192 [+]
Reference genome Glycine_max_v2.0
Source SRR835759;SRR835761;SRR835762;SRR835763;SRR835766;SRR835770;SRR835771
Length 22
Mature sequence(if miRNA) 39 - AAUUAGUUUUGACCGGGACUUA - 60
Stem-loop(if miRNA) --       AC        U   -A    U
  AGUUUUG  CAGAACUA UUG  CUGU U
  |||||||  |||||||| |||  |||| G
  UCAGGGC  GUUUUGAU AAC  GACA U
AU       CA        U   AG    U
Stem-loop sequence AGUUUUGACCAGAACUAUUUGACUGUUUGUUACAGGACAAUUAGUUUUGACCGGGACUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775525.1
ncRNA:22   AUUCAGGGCCAGUUUUGAUUAA   1
  *||||||||||||||||||*||
targets:1605   AAAGUCCCGGUCAAAACUACUU   1626

1.5 PREDICTED: Glycine max uncharacterized LOC106798717 (LOC106798717), mRNA uncharacterized LOC106798717(LOC106798717) coding protein psRNATarget
XM_014775524.1
ncRNA:22   AUUCAGGGCCAGUUUUGAUUAA   1
  *||||||||||||||||||*||
targets:1025   AAAGUCCCGGUCAAAACUACUU   1046

1.5 PREDICTED: Glycine max myb-related protein 315-like (LOC100777804), mRNA myb-related protein 315-like(LOC100777804) coding protein psRNATarget
XM_006602208.2
ncRNA:22   AUUCAGGGCCAGUUUUGAUUAA   1
  *|=|||=||||||||||||*||
targets:1110   GAGGUCUCGGUCAAAACUACUU   1131

2.5 PREDICTED: Glycine max WD repeat-containing protein 26-like (LOC100781300), transcript variant X2, mRNA WD repeat-containing protein 26-like(LOC100781300) coding protein psRNATarget
XM_006602207.2
ncRNA:22   AUUCAGGGCCAGUUUUGAUUAA   1
  *|=|||=||||||||||||*||
targets:1108   GAGGUCUCGGUCAAAACUACUU   1129

2.5 PREDICTED: Glycine max WD repeat-containing protein 26-like (LOC100781300), transcript variant X1, mRNA WD repeat-containing protein 26-like(LOC100781300) coding protein psRNATarget