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BaseInfo

ncRNA ID	novel_gma_miR5383
Species	Glycine max
Class	miRNA
Genome position	Chr17:16146044-16146091 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835759
Length	23
Mature sequence(if miRNA)	1 - UUGCGGGGUAGGAUUGCAUAAAC - 23
Stem-loop(if miRNA)	--     -      GA        A   UUGCG GGGUAG  UUGCAUAA C   ||||| ||||||  ||||||||   AACGU UCUAUC  AAUGUAUU A AA     A      -A        A
Stem-loop sequence	UUGCGGGGUAGGAUUGCAUAAACAAUUAUGUAAACUAUCUAUGCAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK286453.1	ncRNA:23   CAAAUACGUUAGGAUGGGGCGUU   1   |*|*||||||||||||||||||| targets:625   GGUGAUGCAAUCCUACCCCGCAA   647 Target Full Sequence	0.0	Glycine max cDNA, clone: GMFL01-28-L19	NA	coding protein	psRNATarget
XM_006605610.2	ncRNA:23   CAAAUACGUUAGGAUGGGGCGUU   1   *||*|||||||||||||=||||| targets:2001   CUUGAUGCAAUCCUACCUCGCAA   2023 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100817889 (LOC100817889), transcript variant X9, mRNA	uncharacterized LOC100817889(LOC100817889)	coding protein	psRNATarget
XM_006605609.2	ncRNA:23   CAAAUACGUUAGGAUGGGGCGUU   1   *||*|||||||||||||=||||| targets:2005   CUUGAUGCAAUCCUACCUCGCAA   2027 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100817889 (LOC100817889), transcript variant X6, mRNA	uncharacterized LOC100817889(LOC100817889)	coding protein	psRNATarget
XM_006573188.2	ncRNA:23   CAAAUACGUUAGGAUGGGGCGUU   1   **|*|||||||||||||||*||| targets:501   ACUGAUGCAAUCCUACCCCUCAA   523 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100816026 (LOC100816026), transcript variant X2, mRNA	uncharacterized LOC100816026(LOC100816026)	coding protein	psRNATarget
XM_006605524.2	ncRNA:23   CAAAUACGUUAGGAUGGGGCGUU   1   **|*|||||||||||||||*||| targets:1439   ACUGAUGCAAUCCUACCCCCCAA   1461 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102667622 (LOC102667622), mRNA	uncharacterized LOC102667622(LOC102667622)	coding protein	psRNATarget
XM_014764755.1	ncRNA:23   CAAAUACGUUAGGAUGGGGCGUU   1   **|*|||||||||||||||*||| targets:519   UCUGAUGCAAUCCUACCCCCCAA   541 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC100782437 (LOC100782437), mRNA	uncharacterized LOC100782437(LOC100782437)	coding protein	psRNATarget
XM_014772498.1	ncRNA:23   CAAAUACGUUAGGAUGGGGCGUU   1   **|*||||=||||||||||*||| targets:2594   AAUGAUGCGAUCCUACCCCCCAA   2616 Target Full Sequence	2.5	PREDICTED: Glycine max vacuolar protein-sorting-associated protein 37 homolog 2-like (LOC100801006), partial mRNA	vacuolar protein-sorting-associated protein 37 homolog 2-like(LOC100801006)	coding protein	psRNATarget