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BaseInfo

ncRNA ID novel_gma_miR5370
Species Glycine max
Class miRNA
Genome position Chr10:38702555-38702718 [+]
Reference genome Glycine_max_v2.0
Source SRR835759
Length 21
Mature sequence(if miRNA) 144 - UUAGUUGACAAAGACACGGUG - 164
Stem-loop(if miRNA) -UA    G  AG   GG     G   AAAAA    A        G  AG   AUGAGA    -GG      AA   AAAUAA   GGGA
   CGUG CU  GUU  UUAAG AUG     UGGU UAUAAAAU GG  UAA      GGUG   AUAUGU  GUC      UGG    G
   |||| ||  |||  ||||| |||     |||| |||||||| ||  |||      ||||   ||||||  |||      |||
   GCAC GA  CAG  GAUUC UGC     AUUA AUGUUUUG UC  GUU      UUAU   UAUACG  CGG      ACU    G
GUG    A  AA   UU     -   --GGG    -        G  GU   -----G    AGG      --   ---GGA   AAGA
Stem-loop sequence UACGUGGCUAGGUUGGUUAAGGAUGAAAAAUGGUAUAUAAAAUGGGAGUAAAUGAGAGGUGGGAUAUGUAAGUCAAAUAAUGGGGGAGGAGAAUCAAGGGGCGCAUAUGGAUAUUGUUGUGCUGGUUUUGUAAUUAGGGCGUCUUAGUUGACAAAGACACGGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003536022.3
ncRNA:21   GUGGCACAGAAACAGUUGAUU   1
  |||||||||||||||||||||
targets:51   CACCGUGUCUUUGUCAACUAA   71

0.0 PREDICTED: Glycine max respiratory burst oxidase homolog protein B-like (LOC100799682), mRNA respiratory burst oxidase homolog protein B-like(LOC100799682) coding protein psRNATarget