ncRNA ID | novel_gma_miR5370 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:38702555-38702718 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835759 |
Length | 21 |
Mature sequence(if miRNA) | 144 - UUAGUUGACAAAGACACGGUG - 164 |
Stem-loop(if miRNA) |
-UA    G  AG   GG     G   AAAAA    A        G  AG   AUGAGA    -GG      AA   AAAUAA   GGGA    CGUG CU  GUU  UUAAG AUG     UGGU UAUAAAAU GG  UAA      GGUG   AUAUGU  GUC      UGG    G    |||| ||  |||  ||||| |||     |||| |||||||| ||  |||      ||||   ||||||  |||      |||    GCAC GA  CAG  GAUUC UGC     AUUA AUGUUUUG UC  GUU      UUAU   UAUACG  CGG      ACU    G GUG    A  AA   UU     -   --GGG    -        G  GU   -----G    AGG      --   ---GGA   AAGA |
Stem-loop sequence | UACGUGGCUAGGUUGGUUAAGGAUGAAAAAUGGUAUAUAAAAUGGGAGUAAAUGAGAGGUGGGAUAUGUAAGUCAAAUAAUGGGGGAGGAGAAUCAAGGGGCGCAUAUGGAUAUUGUUGUGCUGGUUUUGUAAUUAGGGCGUCUUAGUUGACAAAGACACGGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003536022.3 |
|
0.0 | PREDICTED: Glycine max respiratory burst oxidase homolog protein B-like (LOC100799682), mRNA | respiratory burst oxidase homolog protein B-like(LOC100799682) | coding protein | psRNATarget |