Search result

BaseInfo

ncRNA ID	novel_gma_miR5358
Species	Glycine max
Class	miRNA
Genome position	Chr12:5469270-5469395 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835759
Length	21
Mature sequence(if miRNA)	106 - AACCUAACAGAAGAACUUUAA - 126
Stem-loop(if miRNA)	--                U  CA     A        -          U   C    UUUUUUU   AAAGUUCUUCUGUUAG UU  AUUUU CUUAAAAC AUCCAUUUUA UUU UUAA       U   |||||||||||||||| ||  ||||| |||||||| |||||||||| ||| ||||   UUUCAAGAAGACAAUC AA  UGAAA GGGUUUUG UAGGUAAGAU AAA AAUU       U AA                C  AC     -        G          U   A    UUACUGU
Stem-loop sequence	AAAGUUCUUCUGUUAGUUUCAAUUUUACUUAAAACAUCCAUUUUAUUUUCUUAAUUUUUUUUUUGUCAUUUUAAAAAAUUAGAAUGGAUGGUUUUGGGAAAGUCAAACCUAACAGAAGAACUUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003530164.3	ncRNA:21   AAUUUCAAGAAGACAAUCCAA   1   |*|=||||||||||||*|||| targets:45   UCAGAGUUCUUCUGUUUGGUU   65 Target Full Sequence	2.5	PREDICTED: Glycine max laccase-17-like (LOC100810993), mRNA	laccase-17-like(LOC100810993)	coding protein	psRNATarget