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BaseInfo

ncRNA ID novel_gma_miR5356
Species Glycine max
Class miRNA
Genome position Chr12:17247563-17247615 [+]
Reference genome Glycine_max_v2.0
Source SRR835759
Length 21
Mature sequence(if miRNA) 1 - ACUCGGAGCAGACUCGGUGGA - 21
Stem-loop(if miRNA) ACUCGGAGCA       --          CA
          GACUCGG  UGGACUCGUG  A
          |||||||  ||||||||||
          UUGAGUC  AUCUGAGCAC  A
---------G       UG          UC
Stem-loop sequence ACUCGGAGCAGACUCGGUGGACUCGUGCAAACUCACGAGUCUAGUCUGAGUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776497.1
ncRNA:21   AGGUGGCUCAGACGAGGCUCA   1
  ***|||||||||*||||||||
targets:493   CGGACCGAGUCUACUCCGAGU   513

2.5 PREDICTED: Glycine max uncharacterized LOC100782837 (LOC100782837), transcript variant X2, mRNA uncharacterized LOC100782837(LOC100782837) coding protein psRNATarget
XM_006581755.2
ncRNA:21   AGGUGGCUCAGACGAGGCUCA   1
  ***|||||||||*||||||||
targets:493   CGGACCGAGUCUACUCCGAGU   513

2.5 PREDICTED: Glycine max uncharacterized LOC100782837 (LOC100782837), transcript variant X1, mRNA uncharacterized LOC100782837(LOC100782837) coding protein psRNATarget