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BaseInfo

ncRNA ID	novel_gma_miR5352
Species	Glycine max
Class	miRNA
Genome position	Chr10:11911001-11911045 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835759
Length	22
Mature sequence(if miRNA)	24 - UUUCCUUGGAAAGUUGAUGGUA - 45
Stem-loop(if miRNA)	--     --   C       C  G   CCAUU  CUU UUCAAGG AA A   |||||  ||| ||||||| ||   GGUAG  GAA AGGUUCC UU A AU     UU   -       U  A
Stem-loop sequence	CCAUUCUUCUUCAAGGCAAGAAAUUUCCUUGGAAAGUUGAUGGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014764111.1	ncRNA:22   AUGGUAGUUGAAAGGUUCCUUU   1   ||||||*||||*|||||||||| targets:3746   UACCAUAAACUCUCCAAGGAAA   3767 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106795195 (LOC106795195), transcript variant X2, mRNA	uncharacterized LOC106795195(LOC106795195)	coding protein	psRNATarget
XM_014764110.1	ncRNA:22   AUGGUAGUUGAAAGGUUCCUUU   1   ||||||*||||*|||||||||| targets:3875   UACCAUAAACUCUCCAAGGAAA   3896 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106795195 (LOC106795195), transcript variant X1, mRNA	uncharacterized LOC106795195(LOC106795195)	coding protein	psRNATarget
XM_006578862.2	ncRNA:22   AUGG-UAGUUGAAAGGUUCCUUU   1   |=||-|||||||||||||||||= targets:265   UGCCUAUCAACUUUCCAAGGAAG   287 Target Full Sequence	3.0	PREDICTED: Glycine max dehydrogenase/reductase SDR family member on chromosome X-like (LOC100818046), transcript variant X4, mRNA	dehydrogenase/reductase SDR family member on chromosome X-like(LOC100818046)	coding protein	psRNATarget
XM_006578863.2	ncRNA:22   AUGG-UAGUUGAAAGGUUCCUUU   1   |=||-|||||||||||||||||= targets:265   UGCCUAUCAACUUUCCAAGGAAG   287 Target Full Sequence	3.0	PREDICTED: Glycine max dehydrogenase/reductase SDR family member on chromosome X-like (LOC100818046), transcript variant X5, mRNA	dehydrogenase/reductase SDR family member on chromosome X-like(LOC100818046)	coding protein	psRNATarget
XM_006578861.2	ncRNA:22   AUGG-UAGUUGAAAGGUUCCUUU   1   |=||-|||||||||||||||||= targets:265   UGCCUAUCAACUUUCCAAGGAAG   287 Target Full Sequence	3.0	PREDICTED: Glycine max dehydrogenase/reductase SDR family member on chromosome X-like (LOC100818046), transcript variant X3, mRNA	dehydrogenase/reductase SDR family member on chromosome X-like(LOC100818046)	coding protein	psRNATarget
XM_014774960.1	ncRNA:22   AUGG-UAGUUGAAAGGUUCCUUU   1   |=||-|||||||||||||||||= targets:22   UGCCUAUCAACUUUCCAAGGAAG   44 Target Full Sequence	3.0	PREDICTED: Glycine max dehydrogenase/reductase SDR family member on chromosome X-like (LOC100818046), transcript variant X7, mRNA	dehydrogenase/reductase SDR family member on chromosome X-like(LOC100818046)	coding protein	psRNATarget
XM_014774959.1	ncRNA:22   AUGG-UAGUUGAAAGGUUCCUUU   1   |=||-|||||||||||||||||= targets:99   UGCCUAUCAACUUUCCAAGGAAG   121 Target Full Sequence	3.0	PREDICTED: Glycine max dehydrogenase/reductase SDR family member on chromosome X-like (LOC100818046), transcript variant X6, mRNA	dehydrogenase/reductase SDR family member on chromosome X-like(LOC100818046)	coding protein	psRNATarget
XM_003523332.3	ncRNA:22   AUGG-UAGUUGAAAGGUUCCUUU   1   |=||-|||||||||||||||||= targets:265   UGCCUAUCAACUUUCCAAGGAAG   287 Target Full Sequence	3.0	PREDICTED: Glycine max dehydrogenase/reductase SDR family member on chromosome X-like (LOC100818046), transcript variant X1, mRNA	dehydrogenase/reductase SDR family member on chromosome X-like(LOC100818046)	coding protein	psRNATarget