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BaseInfo

ncRNA ID novel_gma_miR5346
Species Glycine max
Class miRNA
Genome position Chr11:26666431-26666533 [-]
Reference genome Glycine_max_v2.0
Source SRR835758;SRR835759;SRR835761;SRR835763;SRR835765;SRR835767;SRR835773
Length 22
Mature sequence(if miRNA) 82 - UUGGAUACAAGGAUAGAAGUGU - 103
Stem-loop(if miRNA) --       C   GA                  C              A GC
  UUGGAUA AAG  UAGAAGUGUUUUUAAGAG UUCUCUACUGGAAA A  U
  ||||||| |||  |||||||||||||||||| |||||||||||||| |
  AACCUAU UUC  GUCUUCAUGAAAAUUCUC AAGAGAUGAUCUUU U  C
UA       A   -A                  A              A AU
Stem-loop sequence UUGGAUACAAGGAUAGAAGUGUUUUUAAGAGCUUCUCUACUGGAAAAAGCUCUAUAUUUCUAGUAGAGAAACUCUUAAAAGUACUUCUGACUUAUAUCCAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003552549.3
ncRNA:22   UGUGAAGAUAGGAACAUAGGUU   1
  |=*||||||||=||||||||||
targets:118   AUUCUUCUAUCUUUGUAUCCAA   139

1.5 PREDICTED: Glycine max uncharacterized LOC100782214 (LOC100782214), mRNA uncharacterized LOC100782214(LOC100782214) coding protein psRNATarget
XM_006578927.2
ncRNA:22   UGUGAAGAUAGGAACAUAGGUU   1
  ==|||||||*||||||||||||
targets:2213   GUACUUCUAGCCUUGUAUCCAA   2234

1.5 PREDICTED: Glycine max auxin response factor 17-like (LOC102662128), mRNA auxin response factor 17-like(LOC102662128) coding protein psRNATarget