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BaseInfo

ncRNA ID novel_gma_miR5345
Species Glycine max
Class miRNA
Genome position Chr10:5080460-5080562 [-]
Reference genome Glycine_max_v2.0
Source SRR835758;SRR835763
Length 21
Mature sequence(if miRNA) 1 - UGUAUGAACCAUACGGAUUGU - 21
Stem-loop(if miRNA) --                              C       G         U
  AAUCCGUAUGGUUCAUACAGAUCAGUAAUC GUAUGAA CAUACAGAU A
  |||||||||||||||||||||||||||||| ||||||| ||||||||| G
  UUAGGCAUACCAAGUAUGUCUAGUCAUUAG CAUACUU GUAUGUUUA C
UG                              A       G         A
Stem-loop sequence AAUCCGUAUGGUUCAUACAGAUCAGUAAUCCGUAUGAAGCAUACAGAUUAGCAAUUUGUAUGGUUCAUACAGAUUACUGAUCUGUAUGAACCAUACGGAUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767686.1
ncRNA:21   UGUUAGGCAUACCAAGUAUGU   1
  |*|||||*|||*|||||||||
targets:2743   AAAAUCCCUAUCGUUCAUACA   2763

2.5 PREDICTED: Glycine max uncharacterized LOC100778749 (LOC100778749), mRNA uncharacterized LOC100778749(LOC100778749) coding protein psRNATarget
XM_014762692.1
ncRNA:21   UGUUAGGCAUACCAAGUAUGU   1
  |*|||||*|||*|||||||||
targets:1270   AAAAUCCCUAUCGUUCAUACA   1290

2.5 PREDICTED: Glycine max uncharacterized LOC100809129 (LOC100809129), mRNA uncharacterized LOC100809129(LOC100809129) coding protein psRNATarget
XM_014768726.1
ncRNA:21   UGUUAGGCAUACCAAGUAUGU   1
  |*|||||*|||*|||||||||
targets:3379   AAAAUCCCUAUCGUUCAUACA   3399

2.5 PREDICTED: Glycine max uncharacterized LOC100782578 (LOC100782578), mRNA uncharacterized LOC100782578(LOC100782578) coding protein psRNATarget