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BaseInfo

ncRNA ID novel_gma_miR5322
Species Glycine max
Class miRNA
Genome position Chr5:34751729-34751812 [+]
Reference genome Glycine_max_v2.0
Source SRR835758
Length 20
Mature sequence(if miRNA) 65 - UUAAAAAGUGUAUGUGUAAG - 84
Stem-loop(if miRNA) --                    U      AUC   AUG   U
  UACACAUACACUUUUUAAUC GUUUUA   CCU   AUU U
  |||||||||||||||||||| ||||||   |||   |||
  AUGUGUAUGUGAAAAAUUAG CAAAAU   GGA   UAA U
GA                    U      CAA   CCA   G
Stem-loop sequence UACACAUACACUUUUUAAUCUGUUUUAAUCCCUAUGAUUUUUGAAUACCAGGAACUAAAACUGAUUAAAAAGUGUAUGUGUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK286737.1
ncRNA:20   GAAUGUGUAUGUGAAAAAUU   1
  =|||=|||||||||*|||||
targets:1094   UUUAUACAUACACUCUUUAA   1113

2.5 Glycine max cDNA, clone: GMFL01-35-L17 NA coding protein psRNATarget
XM_006599236.2
ncRNA:20   GAAUGUGUAUGUGAAAAAUU   1
  **|||||||||||*||||||
targets:468   GAUACACAUACACAUUUUAA   487

2.5 PREDICTED: Glycine max uncharacterized LOC100788736 (LOC100788736), transcript variant X1, mRNA uncharacterized LOC100788736(LOC100788736) coding protein psRNATarget
XM_003521103.3
ncRNA:20   GAAUGUGUAUGUGAAAAAUU   1
  ***|||=|||||||||||||
targets:388   GACACAUAUACACUUUUUAA   407

3.0 PREDICTED: Glycine max triacylglycerol lipase SDP1-like (LOC100791261), mRNA triacylglycerol lipase SDP1-like(LOC100791261) coding protein psRNATarget