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BaseInfo

ncRNA ID	novel_gma_miR5317
Species	Glycine max
Class	miRNA
Genome position	Chr5:12079490-12079544 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835758
Length	22
Mature sequence(if miRNA)	1 - UUUUCAAAAAAUCGUCUUAGAA - 22
Stem-loop(if miRNA)	---        A               U    UUUUCAAA AAUCGUCUUAGAAAG U    |||||||| |||||||||||||||    AAAAGUUU UUGGCAGAAUCUUUU U CUA        C               A
Stem-loop sequence	UUUUCAAAAAAUCGUCUUAGAAAGUUUAUUUUCUAAGACGGUUCUUUGAAAAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014768380.1	ncRNA:22   AAGAUUCUGCUAAAAAACUUUU   1   |||*||*||||||||||||||| targets:97   UUCAAAAACGAUUUUUUGAAAA   118 Target Full Sequence	2.0	PREDICTED: Glycine max probable protein phosphatase 2C 11 (LOC100779272), transcript variant X1, mRNA	probable protein phosphatase 2C 11(LOC100779272)	coding protein	psRNATarget
XM_014768381.1	ncRNA:22   AAGAUUCUGCUAAAAAACUUUU   1   |||*||*||||||||||||||| targets:97   UUCAAAAACGAUUUUUUGAAAA   118 Target Full Sequence	2.0	PREDICTED: Glycine max probable protein phosphatase 2C 11 (LOC100779272), transcript variant X2, mRNA	probable protein phosphatase 2C 11(LOC100779272)	coding protein	psRNATarget
XM_006602706.2	ncRNA:22   AAGAUUCUGCUAAAAAACUUUU   1   **=*||||=||||||||||||| targets:2456   AGUAAAGAUGAUUUUUUGAAAA   2477 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100819614 (LOC100819614), mRNA	uncharacterized LOC100819614(LOC100819614)	coding protein	psRNATarget
XM_014770737.1	ncRNA:22   AAGAUUCUGCUAAAAAACUUUU   1   **=*||||=||||||||||||| targets:2312   AGUAAAGAUGAUUUUUUGAAAA   2333 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC102669442 (LOC102669442), mRNA	uncharacterized LOC102669442(LOC102669442)	coding protein	psRNATarget
XM_014774655.1	ncRNA:22   AAGAUUCUGCUAAAAAACUUUU   1   ||*|||||||||||*||||||* targets:461   UUAUAAGACGAUUUCUUGAAAC   482 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798161 (LOC100798161), transcript variant X3, mRNA	uncharacterized LOC100798161(LOC100798161)	coding protein	psRNATarget
XM_014771172.1	ncRNA:22   AAGAUUCUGCUAAAAAACUUUU   1   **|**|||=||||||||||||| targets:2011   AACAUAGAUGAUUUUUUGAAAA   2032 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC102669178 (LOC102669178), mRNA	uncharacterized LOC102669178(LOC102669178)	coding protein	psRNATarget