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BaseInfo

ncRNA ID novel_gma_miR5310
Species Glycine max
Class miRNA
Genome position Chr3:10169144-10169206 [-]
Reference genome Glycine_max_v2.0
Source SRR835758;SRR835761;SRR835762;SRR835763;SRR835765;SRR835766;SRR835767;SRR835768;SRR835771;SRR835773
Length 22
Mature sequence(if miRNA) 1 - CCUGAUGGGGAAGUAGGAAUAU - 22
Stem-loop(if miRNA) --               C    CUA    AC
  AUUCCUACUUCCCCA CAGG   UGAU  C
  ||||||||||||||| ||||   ||||  A
  UAAGGAUGAAGGGGU GUCC   ACUA  G
UA               A    ACG    GA
Stem-loop sequence AUUCCUACUUCCCCACCAGGCUAUGAUACCAGAGAUCAGCACCUGAUGGGGAAGUAGGAAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK286264.1
ncRNA:22   UAUAAGGAUGAAGGGGUAGUCC   1
  *|**|=||=|||||||||||||
targets:965   CUCCUUCUGCUUCCCCAUCAGG   986

3.0 Glycine max cDNA, clone: GMFL01-25-B19 NA coding protein psRNATarget
XM_003544015.3
ncRNA:22   UAUAAGGAUGAAGGGGUAGUCC   1
  *|**|=||=|||||||||||||
targets:1024   CUCCUUCUGCUUCCCCAUCAGG   1045

3.0 PREDICTED: Glycine max probable inactive receptor-like protein kinase At3g56050 (LOC100820416), mRNA probable inactive receptor-like protein kinase At3g56050(LOC100820416) coding protein psRNATarget