ncRNA ID | novel_gma_miR5304 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:32171314-32171482 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835758 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCAACUUGAUCCGGAAGAUGCU - 22 |
Stem-loop(if miRNA) |
--    CU                                       U    G                           U      UCAA  UGAUCCGGAAGAUGCUUAUGGAUCAACUUGAUCCGUAAG UGUU AAUAUGCUUCUGGAUCAAGUUGAUUCG AAGC   ||||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||A   AGUU  ACUAGGUUUUCUACGAAUGCUUAGUUGAACUAGGCAUUC ACAA UUGUACGAAGGCCUAGUUCAACUAGGU UUCU CU    CC                                       C    A                           U    |
Stem-loop sequence | UCAACUUGAUCCGGAAGAUGCUUAUGGAUCAACUUGAUCCGUAAGUUGUUGAAUAUGCUUCUGGAUCAAGUUGAUUCGUAAGCAUCUUUUGGAUCAACUUGAUCCGGAAGCAUGUUAAACACCUUACGGAUCAAGUUGAUUCGUAAGCAUCUUUUGGAUCACCUUGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003547498.3 |
|
3.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
XM_014768353.1 |
|
3.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |