Search result

BaseInfo

ncRNA ID novel_gma_miR5285
Species Glycine max
Class miRNA
Genome position Chr18:36173101-36173158 [+]
Reference genome Glycine_max_v2.0
Source SRR835758
Length 19
Mature sequence(if miRNA) 40 - UUCAGGGUAAUAAGGGGUA - 58
Stem-loop(if miRNA) --          G  CC         A A
  UCCUUUGUUG UC  AAGGGGUAG G A
  |||||||||| ||  ||||||||| | G
  GGGGAAUAAU GG  UUUUUCGUC C U
AU          G  AC         - U
Stem-loop sequence UCCUUUGUUGGUCCCAAGGGGUAGAGAAGUUCCUGCUUUUUCAGGGUAAUAAGGGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768302.1
ncRNA:19   AUGGGGAAUAAUGGGACUU   1
  |||=||||||||||=||||
targets:897   UACUCCUUAUUACCUUGAA   915

2.5 PREDICTED: Glycine max transcription factor bHLH25-like (LOC100794354), transcript variant X2, mRNA transcription factor bHLH25-like(LOC100794354) coding protein psRNATarget