ncRNA ID | novel_gma_miR5277 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:7898681-7898768 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295517;SRR1451612 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CAAGAAAAUGAAUGGUGAGGAU - 22 |
Stem-loop(if miRNA) |
--  G             U        C         UAAU  GUA   CC CACCAUUUAUUUU CUUGAAAU UAAUGGUUG    GA   G   || ||||||||||||| |||||||| |||||||||    ||   GG GUGGUAAGUAAAA GAACUUUA AUUACCAAU    CU   C UA  A             -        U         ---U  AAU |
Stem-loop sequence | CCGCACCAUUUAUUUUUCUUGAAAUCUAAUGGUUGUAAUGAGUAGCUAAUCUUAACCAUUAUAUUUCAAGAAAAUGAAUGGUGAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520509.3 |
|
2.0 | PREDICTED: Glycine max isoamylase 2, chloroplastic-like (LOC100797949), mRNA | isoamylase 2, chloroplastic-like(LOC100797949) | coding protein | psRNATarget | |||||||||
BT090117.1 |
|
3.0 | Soybean clone JCVI-FLGm-3N9 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001251455.2 |
|
3.0 | Glycine max response regulator ARR6-like (LOC100306152), mRNA | uncharacterized LOC100306152(LOC100306152) | coding protein | psRNATarget |