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BaseInfo

ncRNA ID novel_gma_miR5272
Species Glycine max
Class miRNA
Genome position Chr17:1326924-1327002 [+]
Reference genome Glycine_max_v2.0
Source SRR835758;SRR835768;SRR835773
Length 24
Mature sequence(if miRNA) 56 - CACGGAUUGGUGGGUUAUGCGGGC - 79
Stem-loop(if miRNA) CCA C     -C   UUUUGUGUGAGCCAACAAAAUGUCAG
   G UUGGC  CAC                          C
   | |||||  |||
   C GGGCG  UUG                          C
--- -     UA   GGUGGUUAGGCACUACCCGGCUCGGU
Stem-loop sequence CCAGCUUGGCCCACUUUUGUGUGAGCCAACAAAAUGUCAGCCUGGCUCGGCCCAUCACGGAUUGGUGGGUUAUGCGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773997.1
ncRNA:24   CGGGCGUAUUGGGUGGUUAGGCAC   1
  ||=|*||||||||||=||||||||
targets:145   GCUCACAUAACCCACUAAUCCGUG   168

1.5 PREDICTED: Glycine max uncharacterized LOC100775790 (LOC100775790), mRNA uncharacterized LOC100775790(LOC100775790) coding protein psRNATarget