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BaseInfo

ncRNA ID	novel_gma_miR5261
Species	Glycine max
Class	miRNA
Genome position	Chr16:1174568-1174740 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835758;SRR835763;SRR835765;SRR835766;SRR835767;SRR835771;SRR835772
Length	22
Mature sequence(if miRNA)	1 - CCUGAACAAAACUUUGACUGGU - 22
Stem-loop(if miRNA)	-   -        C           A            A        A                    -----------   A     AAUAA  CCU GAACAAAA UUUGACUGGUC AGGUCCCUAAAC UUUAAAAA UUCGGUUUUUAGUCCUUGAA           ACC CAUUA     U  ||| |||||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||||||           ||| |||||  GGA UUUGUUUU AAACUGGCCAG UCCAGGGAUUUG AAAUUUUU AAGCCAAAAAUCAGGAACUU           UGG GUAAU     U A   A        C           A            -        -                    GUUUUCAAACU   G     AGAAA
Stem-loop sequence	CCUGAACAAAACUUUGACUGGUCAAGGUCCCUAAACAUUUAAAAAAUUCGGUUUUUAGUCCUUGAAACCACAUUAAAUAAUUAAAGAUAAUGGGGUUCAAACUUUUGUUCAAGGACUAAAAACCGAAUUUUUAAAGUUUAGGGACCUAGACCGGUCAAACUUUUGUUUAAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014771823.1	ncRNA:22   UGGUCAGUUUCAAAACAAGUCC   1   *||||||||||||||*|||||* targets:364   CCCAGUCAAAGUUUUCUUCAGU   385 Target Full Sequence	2.5	PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 46-like (LOC100816455), transcript variant X3, mRNA	DEAD-box ATP-dependent RNA helicase 46-like(LOC100816455)	coding protein	psRNATarget
XM_014771821.1	ncRNA:22   UGGUCAGUUUCAAAACAAGUCC   1   *||||||||||||||*|||||* targets:402   CCCAGUCAAAGUUUUCUUCAGU   423 Target Full Sequence	2.5	PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 46-like (LOC100816455), transcript variant X1, mRNA	DEAD-box ATP-dependent RNA helicase 46-like(LOC100816455)	coding protein	psRNATarget
XM_014771824.1	ncRNA:22   UGGUCAGUUUCAAAACAAGUCC   1   *||||||||||||||*|||||* targets:403   CCCAGUCAAAGUUUUCUUCAGU   424 Target Full Sequence	2.5	PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 46-like (LOC100816455), transcript variant X4, mRNA	DEAD-box ATP-dependent RNA helicase 46-like(LOC100816455)	coding protein	psRNATarget
XM_014771822.1	ncRNA:22   UGGUCAGUUUCAAAACAAGUCC   1   *||||||||||||||*|||||* targets:441   CCCAGUCAAAGUUUUCUUCAGU   462 Target Full Sequence	2.5	PREDICTED: Glycine max DEAD-box ATP-dependent RNA helicase 46-like (LOC100816455), transcript variant X2, mRNA	DEAD-box ATP-dependent RNA helicase 46-like(LOC100816455)	coding protein	psRNATarget
XM_006573446.2	ncRNA:22   UGGUCA-GUUUCAAAACAAGUCC   1   |==|*|-|||||||||||||||| targets:2425   AUUACUGCAAAGUUUUGUUCAGG   2447 Target Full Sequence	3.0	PREDICTED: Glycine max MORC family CW-type zinc finger protein 3-like (LOC100782161), transcript variant X3, mRNA	MORC family CW-type zinc finger protein 3-like(LOC100782161)	coding protein	psRNATarget
XM_006573445.2	ncRNA:22   UGGUCA-GUUUCAAAACAAGUCC   1   |==|*|-|||||||||||||||| targets:2449   AUUACUGCAAAGUUUUGUUCAGG   2471 Target Full Sequence	3.0	PREDICTED: Glycine max MORC family CW-type zinc finger protein 3-like (LOC100782161), transcript variant X2, mRNA	MORC family CW-type zinc finger protein 3-like(LOC100782161)	coding protein	psRNATarget
XM_006573450.2	ncRNA:22   UGGUCA-GUUUCAAAACAAGUCC   1   |==|*|-|||||||||||||||| targets:2484   AUUACUGCAAAGUUUUGUUCAGG   2506 Target Full Sequence	3.0	PREDICTED: Glycine max MORC family CW-type zinc finger protein 3-like (LOC100782161), transcript variant X7, mRNA	MORC family CW-type zinc finger protein 3-like(LOC100782161)	coding protein	psRNATarget
XM_006573449.2	ncRNA:22   UGGUCA-GUUUCAAAACAAGUCC   1   |==|*|-|||||||||||||||| targets:2488   AUUACUGCAAAGUUUUGUUCAGG   2510 Target Full Sequence	3.0	PREDICTED: Glycine max MORC family CW-type zinc finger protein 3-like (LOC100782161), transcript variant X6, mRNA	MORC family CW-type zinc finger protein 3-like(LOC100782161)	coding protein	psRNATarget
XM_006573447.2	ncRNA:22   UGGUCA-GUUUCAAAACAAGUCC   1   |==|*|-|||||||||||||||| targets:2543   AUUACUGCAAAGUUUUGUUCAGG   2565 Target Full Sequence	3.0	PREDICTED: Glycine max MORC family CW-type zinc finger protein 3-like (LOC100782161), transcript variant X4, mRNA	MORC family CW-type zinc finger protein 3-like(LOC100782161)	coding protein	psRNATarget
XM_014775510.1	ncRNA:22   UGGUCA-GUUUCAAAACAAGUCC   1   |==|*|-|||||||||||||||| targets:2567   AUUACUGCAAAGUUUUGUUCAGG   2589 Target Full Sequence	3.0	PREDICTED: Glycine max MORC family CW-type zinc finger protein 3-like (LOC100782161), transcript variant X1, mRNA	MORC family CW-type zinc finger protein 3-like(LOC100782161)	coding protein	psRNATarget