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BaseInfo

ncRNA ID	novel_gma_miR5247
Species	Glycine max
Class	miRNA
Genome position	Chr14:31098938-31099038 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835758
Length	21
Mature sequence(if miRNA)	1 - UUUGUUUUGAAUGGAAUUGCC - 21
Stem-loop(if miRNA)	--U   U     A          ---- UG   G UU     -      UCUU    UUG UUUGA UGGAAUUGCC    A  ACA G  UAUUA CUACUG    U    ||| ||||| ||||||||||    |  ||| |  ||||| ||||||    G    AAU AGAUU GCCUUAAUGG    U  UGU U  AUAGU GAUGGU    A CUC   U     A          AGGG GU   G -U     U      UUAU
Stem-loop sequence	UUUGUUUUGAAUGGAAUUGCCAUGACAGGUUUAUUACUACUGUCUUUGAUAUUUGGUAGUUGAUAUUGUGUUGUGGGAGGUAAUUCCGAUUAGAUUAACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014766217.1	ncRNA:21   CCGUUAAGGUAAGUUUUGUUU   1   *||||*||||||||||||||= targets:25   AGCAACUCCAUUCAAAACAAG   45 Target Full Sequence	2.0	PREDICTED: Glycine max probable inactive receptor kinase At1g27190 (LOC100814544), mRNA	probable inactive receptor kinase At1g27190(LOC100814544)	coding protein	psRNATarget
NM_001254219.2	ncRNA:21   CCGUUAAGGUAAGUUUUGUUU   1   *||||||||||||||=||||= targets:880   AGCAAUUCCAUUCAAGACAAG   900 Target Full Sequence	2.5	Glycine max probable aquaporin PIP1-2-like (LOC100812711), mRNA	probable aquaporin PIP1-2-like(LOC100812711)	coding protein	psRNATarget
BT097404.1	ncRNA:21   CCGUUAAGGUAAGUUUUGUUU   1   *||||||||||||||=||||= targets:883   AGCAAUUCCAUUCAAGACAAG   903 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-22A1 unknown mRNA	NA	coding protein	psRNATarget
XM_006587296.2	ncRNA:21   CCGUUAAGGUAAGUUUUGUUU   1   **|||*||=|||||||||||| targets:92   UUCAAGUCUAUUCAAAACAAA   112 Target Full Sequence	2.5	PREDICTED: Glycine max protein DETOXIFICATION 49-like (LOC100788027), mRNA	protein DETOXIFICATION 49-like(LOC100788027)	coding protein	psRNATarget
AK244011.1	ncRNA:21   CCGUUAAGGUAAGUUUUGUUU   1   *||||||*|||||||||*||| targets:873   UGCAAUUGCAUUCAAAAAAAA   893 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-01-N17	NA	coding protein	psRNATarget
AK243878.1	ncRNA:21   CCGUUAAGGUAAGUUUUGUUU   1   **|||||||*||||||||||* targets:1438   ACCAAUUCCCUUCAAAACAAC   1458 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-01-H24	NA	coding protein	psRNATarget